WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13D9.5.1 Sequence Name  C13D9.5.1
Length (nt)  876   Chromosome Location  V: 4979947-4980973
Chromosome . Primary Identifier  V Chromosome Location . Start  4979947
Chromosome Location . End  4980973 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13D9.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015737 srsx-12 C13D9.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13D9.5 C13D9.5 876   V: 4979947-4980090

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.5.1 4979947 4980973 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180174   144   V: 4979947-4980090 Caenorhabditis elegans
Exon180175   397   V: 4980145-4980541 Caenorhabditis elegans
Exon180176   205   V: 4980592-4980796 Caenorhabditis elegans
Exon180177   130   V: 4980844-4980973 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.5.1 4979947 4980973 -1

1 Sequence

Length
876

1 Sequence Ontology Term

Identifier Name Description
transcript