WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13D9.8.1 Sequence Name  C13D9.8.1
Length (nt)  2310   Chromosome Location  V: 4991342-4995255
Chromosome . Primary Identifier  V Chromosome Location . Start  4991342
Chromosome Location . End  4995255 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13D9.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003574 ncx-9 C13D9.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13D9.8 C13D9.8 2106   V: 4991505-4991755

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.8.1 4991342 4995255 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180193   414   V: 4991342-4991755 Caenorhabditis elegans
Exon180194   363   V: 4992086-4992448 Caenorhabditis elegans
Exon180195   118   V: 4992499-4992616 Caenorhabditis elegans
Exon180196   278   V: 4992665-4992942 Caenorhabditis elegans
Exon180197   381   V: 4993411-4993791 Caenorhabditis elegans
Exon180198   103   V: 4993837-4993939 Caenorhabditis elegans
Exon180199   180   V: 4993996-4994175 Caenorhabditis elegans
Exon180201   132   V: 4994229-4994360 Caenorhabditis elegans
Exon180202   101   V: 4994863-4994963 Caenorhabditis elegans
Exon180203   240   V: 4995016-4995255 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.8.1 4991342 4995255 -1

1 Sequence

Length
2310

1 Sequence Ontology Term

Identifier Name Description
transcript