WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C13D9.7.1 Sequence Name  C13D9.7.1
Length (nt)  2316   Chromosome Location  V: 4983747-4987197
Chromosome . Primary Identifier  V Chromosome Location . Start  4983747
Chromosome Location . End  4987197 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C13D9.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003573 ncx-8 C13D9.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C13D9.7 C13D9.7 2112   V: 4983910-4984160

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.7.1 4983747 4987197 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180237   414   V: 4983747-4984160 Caenorhabditis elegans
Exon180238   363   V: 4984510-4984872 Caenorhabditis elegans
Exon180239   118   V: 4984922-4985039 Caenorhabditis elegans
Exon180240   278   V: 4985088-4985365 Caenorhabditis elegans
Exon180241   384   V: 4985418-4985801 Caenorhabditis elegans
Exon180242   103   V: 4985848-4985950 Caenorhabditis elegans
Exon180243   180   V: 4986000-4986179 Caenorhabditis elegans
Exon180244   132   V: 4986226-4986357 Caenorhabditis elegans
Exon180245   101   V: 4986782-4986882 Caenorhabditis elegans
Exon180246   243   V: 4986955-4987197 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C13D9.7.1 4983747 4987197 -1

1 Sequence

Length
2316

1 Sequence Ontology Term

Identifier Name Description
transcript