WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D12.4.1 Sequence Name  K11D12.4.1
Length (nt)  2323   Chromosome Location  V: 5023706-5027723
Chromosome . Primary Identifier  V Chromosome Location . Start  5023706
Chromosome Location . End  5027723 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D12.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019644 cpt-4 K11D12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D12.4 K11D12.4 2247   V: 5023775-5024044

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.4.1 5023706 5027723 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180239   339   V: 5023706-5024044 Caenorhabditis elegans
Exon180240   189   V: 5024092-5024280 Caenorhabditis elegans
Exon180241   135   V: 5024328-5024462 Caenorhabditis elegans
Exon180242   165   V: 5024519-5024683 Caenorhabditis elegans
Exon180243   508   V: 5025127-5025634 Caenorhabditis elegans
Exon180244   194   V: 5025682-5025875 Caenorhabditis elegans
Exon180245   288   V: 5026330-5026617 Caenorhabditis elegans
Exon180246   285   V: 5026806-5027090 Caenorhabditis elegans
Exon180247   123   V: 5027456-5027578 Caenorhabditis elegans
Exon180248   97   V: 5027627-5027723 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.4.1 5023706 5027723 -1

1 Sequence

Length
2323

1 Sequence Ontology Term

Identifier Name Description
transcript