WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D12.10a.1 Sequence Name  K11D12.10a.1
Length (nt)  3551   Chromosome Location  V: 5056378-5064803
Chromosome . Primary Identifier  V Chromosome Location . Start  5056378
Chromosome Location . End  5064803 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D12.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003374 mlk-1 K11D12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D12.10a K11D12.10a 3123   V: 5056780-5057011

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.10a.1 5056378 5064803 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180311   634   V: 5056378-5057011 Caenorhabditis elegans
Exon180314   116   V: 5058467-5058582 Caenorhabditis elegans
Exon180318   339   V: 5058634-5058972 Caenorhabditis elegans
Exon180322   250   V: 5059300-5059549 Caenorhabditis elegans
Exon180328   292   V: 5059913-5060204 Caenorhabditis elegans
Exon180332   243   V: 5060314-5060556 Caenorhabditis elegans
Exon180334   197   V: 5060962-5061158 Caenorhabditis elegans
Exon180338   233   V: 5061213-5061445 Caenorhabditis elegans
Exon180342   149   V: 5061502-5061650 Caenorhabditis elegans
Exon180346   165   V: 5061698-5061862 Caenorhabditis elegans
Exon180350   270   V: 5061915-5062184 Caenorhabditis elegans
Exon180354   109   V: 5062232-5062340 Caenorhabditis elegans
Exon180359   220   V: 5062667-5062886 Caenorhabditis elegans
Exon180363   92   V: 5063857-5063948 Caenorhabditis elegans
Exon180367   164   V: 5064011-5064174 Caenorhabditis elegans
Exon180372   78   V: 5064726-5064803 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.10a.1 5056378 5064803 -1

1 Sequence

Length
3551

1 Sequence Ontology Term

Identifier Name Description
transcript