WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D12.10c.1 Sequence Name  K11D12.10c.1
Length (nt)  3610   Chromosome Location  V: 5056378-5064805
Chromosome . Primary Identifier  V Chromosome Location . Start  5056378
Chromosome Location . End  5064805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D12.10c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003374 mlk-1 K11D12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D12.10c K11D12.10c 3180   V: 5056780-5057011

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:K11D12.10c.1 5056378 5064805 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180332   634   V: 5056378-5057011 Caenorhabditis elegans
Exon180337   116   V: 5058467-5058582 Caenorhabditis elegans
Exon180341   339   V: 5058634-5058972 Caenorhabditis elegans
Exon180345   250   V: 5059300-5059549 Caenorhabditis elegans
Exon180348   57   V: 5059807-5059863 Caenorhabditis elegans
Exon180351   292   V: 5059913-5060204 Caenorhabditis elegans
Exon180354   243   V: 5060314-5060556 Caenorhabditis elegans
Exon180357   197   V: 5060962-5061158 Caenorhabditis elegans
Exon180361   233   V: 5061213-5061445 Caenorhabditis elegans
Exon180365   149   V: 5061502-5061650 Caenorhabditis elegans
Exon180369   165   V: 5061698-5061862 Caenorhabditis elegans
Exon180373   270   V: 5061915-5062184 Caenorhabditis elegans
Exon180377   109   V: 5062232-5062340 Caenorhabditis elegans
Exon180382   220   V: 5062667-5062886 Caenorhabditis elegans
Exon180386   92   V: 5063857-5063948 Caenorhabditis elegans
Exon180390   164   V: 5064011-5064174 Caenorhabditis elegans
Exon180394   80   V: 5064726-5064805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:K11D12.10c.1 5056378 5064805 -1

1 Sequence

Length
3610

1 Sequence Ontology Term

Identifier Name Description
transcript