WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K11D12.10d.1 Sequence Name  K11D12.10d.1
Length (nt)  3280   Chromosome Location  V: 5056380-5064777
Chromosome . Primary Identifier  V Chromosome Location . Start  5056380
Chromosome Location . End  5064777 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K11D12.10d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003374 mlk-1 K11D12.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K11D12.10d K11D12.10d 2880   V: 5056780-5057011

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.10d.1 5056380 5064777 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180367   632   V: 5056380-5057011 Caenorhabditis elegans
Exon180372   116   V: 5058467-5058582 Caenorhabditis elegans
Exon180376   339   V: 5058634-5058972 Caenorhabditis elegans
Exon180380   250   V: 5059300-5059549 Caenorhabditis elegans
Exon180386   292   V: 5059913-5060204 Caenorhabditis elegans
Exon180392   197   V: 5060962-5061158 Caenorhabditis elegans
Exon180396   233   V: 5061213-5061445 Caenorhabditis elegans
Exon180400   149   V: 5061502-5061650 Caenorhabditis elegans
Exon180404   165   V: 5061698-5061862 Caenorhabditis elegans
Exon180408   270   V: 5061915-5062184 Caenorhabditis elegans
Exon180412   109   V: 5062232-5062340 Caenorhabditis elegans
Exon180417   220   V: 5062667-5062886 Caenorhabditis elegans
Exon180421   92   V: 5063857-5063948 Caenorhabditis elegans
Exon180425   164   V: 5064011-5064174 Caenorhabditis elegans
Exon180426   52   V: 5064726-5064777 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K11D12.10d.1 5056380 5064777 -1

1 Sequence

Length
3280

1 Sequence Ontology Term

Identifier Name Description
transcript