WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y58A7A.1b.1 Sequence Name  Y58A7A.1b.1
Length (nt)  651   Chromosome Location  V: 5067637-5069540
Chromosome . Primary Identifier  V Chromosome Location . Start  5067637
Chromosome Location . End  5069540 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y58A7A.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021975 Y58A7A.1 Y58A7A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y58A7A.1b Y58A7A.1b 492   V: 5067787-5067982

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.1b.1 5067637 5069540 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180377   346   V: 5067637-5067982 Caenorhabditis elegans
Exon180380   130   V: 5068036-5068165 Caenorhabditis elegans
Exon180382   123   V: 5068549-5068671 Caenorhabditis elegans
Exon180383   52   V: 5069489-5069540 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.1b.1 5067637 5069540 -1

1 Sequence

Length
651

1 Sequence Ontology Term

Identifier Name Description
transcript