WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y58A7A.4.1 Sequence Name  Y58A7A.4.1
Length (nt)  2771   Chromosome Location  V: 5081988-5085007
Chromosome . Primary Identifier  V Chromosome Location . Start  5081988
Chromosome Location . End  5085007 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y58A7A.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021978 Y58A7A.4 Y58A7A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y58A7A.4 Y58A7A.4 2715   V: 5082044-5082708

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.4.1 5081988 5085007 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180398   721   V: 5081988-5082708 Caenorhabditis elegans
Exon180399   226   V: 5082773-5082998 Caenorhabditis elegans
Exon180400   439   V: 5083046-5083484 Caenorhabditis elegans
Exon180401   144   V: 5083531-5083674 Caenorhabditis elegans
Exon180402   980   V: 5083719-5084698 Caenorhabditis elegans
Exon180403   261   V: 5084747-5085007 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.4.1 5081988 5085007 -1

1 Sequence

Length
2771

1 Sequence Ontology Term

Identifier Name Description
transcript