WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y58A7A.6.1 Sequence Name  Y58A7A.6.1
Length (nt)  980   Chromosome Location  V: 5087493-5089547
Chromosome . Primary Identifier  V Chromosome Location . Start  5087493
Chromosome Location . End  5089547 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y58A7A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021980 glb-32 Y58A7A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y58A7A.6 Y58A7A.6 774   V: 5087629-5087736

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.6.1 5087493 5089547 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180408   244   V: 5087493-5087736 Caenorhabditis elegans
Exon180409   126   V: 5087787-5087912 Caenorhabditis elegans
Exon180410   287   V: 5088159-5088445 Caenorhabditis elegans
Exon180411   172   V: 5089177-5089348 Caenorhabditis elegans
Exon180412   151   V: 5089397-5089547 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y58A7A.6.1 5087493 5089547 -1

1 Sequence

Length
980

1 Sequence Ontology Term

Identifier Name Description
transcript