WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C04F5.2a.1 Sequence Name  C04F5.2a.1
Length (nt)  540   Chromosome Location  V: 5093715-5096277
Chromosome . Primary Identifier  V Chromosome Location . Start  5093715
Chromosome Location . End  5096277 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F5.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015444 C04F5.2 C04F5.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C04F5.2a C04F5.2a 540   V: 5093715-5093863

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C04F5.2a.1 5093715 5096277 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180414   149   V: 5093715-5093863 Caenorhabditis elegans
Exon180418   170   V: 5095770-5095939 Caenorhabditis elegans
Exon180420   137   V: 5095991-5096127 Caenorhabditis elegans
Exon180422   84   V: 5096194-5096277 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C04F5.2a.1 5093715 5096277 -1

1 Sequence

Length
540

1 Sequence Ontology Term

Identifier Name Description
transcript