WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C04F5.1 Sequence Name  C04F5.1
Length (nt)  2331   Chromosome Location  V: 5119977-5120020
Chromosome . Primary Identifier  V Chromosome Location . Start  5119977
Chromosome Location . End  5120020
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C04F5.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30331 SID-1 87.9 776 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00000928
WBRNAi00039639
WBRNAi00010132
WBRNAi00076077
WBRNAi00085060

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C04F5.1 5119977 5120020 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004795 sid-1 C04F5.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C04F5.1 5119977 5120020 1
CDS:C04F5.1 5120078 5120457 1
CDS:C04F5.1 5120501 5120778 1
CDS:C04F5.1 5121844 5122405 1
CDS:C04F5.1 5123607 5123993 1
CDS:C04F5.1 5125328 5125830 1
CDS:C04F5.1 5126425 5126601 1

1 Sequence

Length
2331

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C04F5.1.1 C04F5.1.1 2653   V: 5119970-5126916