WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0238.1.1 Sequence Name  B0238.1.1
Length (nt)  1811   Chromosome Location  V: 5240759-5243136
Chromosome . Primary Identifier  V Chromosome Location . Start  5240759
Chromosome Location . End  5243136 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0238.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015067 cest-35.1 B0238.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0238.1 B0238.1 1638   V: 5240857-5241049

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0238.1.1 5240759 5243136 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180631   291   V: 5240759-5241049 Caenorhabditis elegans
Exon180632   266   V: 5241245-5241510 Caenorhabditis elegans
Exon180633   164   V: 5241579-5241742 Caenorhabditis elegans
Exon180634   210   V: 5241791-5242000 Caenorhabditis elegans
Exon180635   123   V: 5242062-5242184 Caenorhabditis elegans
Exon180636   334   V: 5242227-5242560 Caenorhabditis elegans
Exon180637   93   V: 5242610-5242702 Caenorhabditis elegans
Exon180638   162   V: 5242747-5242908 Caenorhabditis elegans
Exon180639   168   V: 5242969-5243136 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0238.1.1 5240759 5243136 -1

1 Sequence

Length
1811

1 Sequence Ontology Term

Identifier Name Description
transcript