WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0238.5a.1 Sequence Name  B0238.5a.1
Length (nt)  971   Chromosome Location  V: 5256142-5257458
Chromosome . Primary Identifier  V Chromosome Location . Start  5256142
Chromosome Location . End  5257458 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0238.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015069 srt-67 B0238.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0238.5a B0238.5a 936   V: 5256142-5256232

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0238.5a.1 5256142 5257458 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180676   91   V: 5256142-5256232 Caenorhabditis elegans
Exon180679   230   V: 5256326-5256555 Caenorhabditis elegans
Exon180683   336   V: 5256602-5256937 Caenorhabditis elegans
Exon180685   156   V: 5257096-5257251 Caenorhabditis elegans
Exon180687   158   V: 5257301-5257458 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0238.5a.1 5256142 5257458 -1

1 Sequence

Length
971

1 Sequence Ontology Term

Identifier Name Description
transcript