WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0238.12.2 Sequence Name  B0238.12.2
Length (nt)  1361   Chromosome Location  V: 5266016-5268828
Chromosome . Primary Identifier  V Chromosome Location . Start  5266016
Chromosome Location . End  5268828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0238.12.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015076 spi-2 B0238.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0238.12 B0238.12 501   V: 5267903-5267905

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0238.12.2 5266016 5268828 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180710   200   V: 5266016-5266215 Caenorhabditis elegans
Exon180711   560   V: 5267346-5267905 Caenorhabditis elegans
Exon180713   55   V: 5267977-5268031 Caenorhabditis elegans
Exon180715   122   V: 5268082-5268203 Caenorhabditis elegans
Exon180717   424   V: 5268405-5268828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0238.12.2 5266016 5268828 1

1 Sequence

Length
1361

1 Sequence Ontology Term

Identifier Name Description
transcript