WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10G8.5c.1 Sequence Name  C10G8.5c.1
Length (nt)  1261   Chromosome Location  V: 5307658-5309669
Chromosome . Primary Identifier  V Chromosome Location . Start  5307658
Chromosome Location . End  5309669 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10G8.5c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003567 ncx-2 C10G8.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10G8.5c C10G8.5c 1218   V: 5307701-5307741

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10G8.5c.1 5307658 5309669 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180760   84   V: 5307658-5307741 Caenorhabditis elegans
Exon180766   101   V: 5307786-5307886 Caenorhabditis elegans
Exon180770   96   V: 5308079-5308174 Caenorhabditis elegans
Exon180773   159   V: 5308477-5308635 Caenorhabditis elegans
Exon180777   122   V: 5308802-5308923 Caenorhabditis elegans
Exon180781   699   V: 5308971-5309669 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10G8.5c.1 5307658 5309669 1

1 Sequence

Length
1261

1 Sequence Ontology Term

Identifier Name Description
transcript