WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C10G8.2.1 Sequence Name  C10G8.2.1
Length (nt)  627   Chromosome Location  V: 5314404-5315589
Chromosome . Primary Identifier  V Chromosome Location . Start  5314404
Chromosome Location . End  5315589 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C10G8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015681 C10G8.2 C10G8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C10G8.2 C10G8.2 627   V: 5314404-5314455

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C10G8.2.1 5314404 5315589 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180792   52   V: 5314404-5314455 Caenorhabditis elegans
Exon180793   189   V: 5314499-5314687 Caenorhabditis elegans
Exon180794   62   V: 5315116-5315177 Caenorhabditis elegans
Exon180795   82   V: 5315225-5315306 Caenorhabditis elegans
Exon180796   242   V: 5315348-5315589 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C10G8.2.1 5314404 5315589 1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
transcript