WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T09D3.5 Sequence Name  T09D3.5
Length (nt)  1101   Chromosome Location  V: 5342139-5342307
Chromosome . Primary Identifier  V Chromosome Location . Start  5342139
Chromosome Location . End  5342307
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09D3.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45086 SRG-25 42.1 366 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00052947

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T09D3.5 5342139 5342307 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005182 srg-25 T09D3.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:T09D3.5 5342139 5342307 -1
CDS:T09D3.5 5342403 5342506 -1
CDS:T09D3.5 5342554 5342736 -1
CDS:T09D3.5 5342781 5342924 -1
CDS:T09D3.5 5343496 5343714 -1
CDS:T09D3.5 5343765 5343977 -1
CDS:T09D3.5 5344297 5344365 -1

1 Sequence

Length
1101

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T09D3.5.1 T09D3.5.1 1455   V: 5342094-5345519
Transcript:T09D3.5.2 T09D3.5.2 1231   V: 5342100-5344456