WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T09D3.8.2 Sequence Name  T09D3.8.2
Length (nt)  675   Chromosome Location  V: 5365241-5366792
Chromosome . Primary Identifier  V Chromosome Location . Start  5365241
Chromosome Location . End  5366792 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T09D3.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044538 T09D3.8 T09D3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T09D3.8 T09D3.8 501   V: 5365519-5365656

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T09D3.8.2 5365241 5366792 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180897   21   V: 5365241-5365261 Caenorhabditis elegans
Exon180900   161   V: 5365496-5365656 Caenorhabditis elegans
Exon180902   49   V: 5366117-5366165 Caenorhabditis elegans
Exon180905   76   V: 5366215-5366290 Caenorhabditis elegans
Exon180908   85   V: 5366337-5366421 Caenorhabditis elegans
Exon180911   104   V: 5366466-5366569 Caenorhabditis elegans
Exon180914   179   V: 5366614-5366792 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T09D3.8.2 5365241 5366792 1

1 Sequence

Length
675

1 Sequence Ontology Term

Identifier Name Description
transcript