WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35A11.4.2 Sequence Name  C35A11.4.2
Length (nt)  1781   Chromosome Location  V: 5389341-5393026
Chromosome . Primary Identifier  V Chromosome Location . Start  5389341
Chromosome Location . End  5393026 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35A11.4.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016431 C35A11.4 C35A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35A11.4 C35A11.4 1548   V: 5389564-5389716

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35A11.4.2 5389341 5393026 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180951   376   V: 5389341-5389716 Caenorhabditis elegans
Exon180954   151   V: 5389768-5389918 Caenorhabditis elegans
Exon180956   161   V: 5389968-5390128 Caenorhabditis elegans
Exon180958   132   V: 5390837-5390968 Caenorhabditis elegans
Exon180960   196   V: 5391018-5391213 Caenorhabditis elegans
Exon180962   204   V: 5391267-5391470 Caenorhabditis elegans
Exon180964   114   V: 5391870-5391983 Caenorhabditis elegans
Exon180966   98   V: 5392033-5392130 Caenorhabditis elegans
Exon180968   159   V: 5392634-5392792 Caenorhabditis elegans
Exon180970   190   V: 5392837-5393026 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35A11.4.2 5389341 5393026 -1

1 Sequence

Length
1781

1 Sequence Ontology Term

Identifier Name Description
transcript