WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C35A11.4.1 Sequence Name  C35A11.4.1
Length (nt)  1703   Chromosome Location  V: 5389480-5393148
Chromosome . Primary Identifier  V Chromosome Location . Start  5389480
Chromosome Location . End  5393148 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C35A11.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016431 C35A11.4 C35A11.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35A11.4 C35A11.4 1548   V: 5389564-5389716

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C35A11.4.1 5389480 5393148 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon180952   237   V: 5389480-5389716 Caenorhabditis elegans
Exon180953   151   V: 5389768-5389918 Caenorhabditis elegans
Exon180955   161   V: 5389968-5390128 Caenorhabditis elegans
Exon180957   132   V: 5390837-5390968 Caenorhabditis elegans
Exon180959   196   V: 5391018-5391213 Caenorhabditis elegans
Exon180961   204   V: 5391267-5391470 Caenorhabditis elegans
Exon180963   114   V: 5391870-5391983 Caenorhabditis elegans
Exon180965   98   V: 5392033-5392130 Caenorhabditis elegans
Exon180967   159   V: 5392634-5392792 Caenorhabditis elegans
Exon180969   188   V: 5392837-5393024 Caenorhabditis elegans
Exon180971   63   V: 5393086-5393148 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C35A11.4.1 5389480 5393148 -1

1 Sequence

Length
1703

1 Sequence Ontology Term

Identifier Name Description
transcript