WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F08F3.3 Sequence Name  F08F3.3
Length (nt)  1392   Chromosome Location  V: 5428217-5428270
Chromosome . Primary Identifier  V Chromosome Location . Start  5428217
Chromosome Location . End  5428270
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE09259 RHR-1 51.1 463 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00044017
WBRNAi00030654
WBRNAi00002398
WBRNAi00077594

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F08F3.3 5428217 5428270 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004358 rhr-1 F08F3.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F08F3.3 5428217 5428270 1
CDS:F08F3.3 5428564 5429010 1
CDS:F08F3.3 5429059 5429355 1
CDS:F08F3.3 5429554 5429840 1
CDS:F08F3.3 5429889 5430129 1
CDS:F08F3.3 5430181 5430246 1

1 Sequence

Length
1392

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F08F3.3.1 F08F3.3.1 1634   V: 5428160-5430431