WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F3.2b.1 Sequence Name  F08F3.2b.1
Length (nt)  2330   Chromosome Location  V: 5433386-5437095
Chromosome . Primary Identifier  V Chromosome Location . Start  5433386
Chromosome Location . End  5437095 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017261 acl-6 F08F3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F3.2b F08F3.2b 1677   V: 5434037-5434391

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.2b.1 5433386 5437095 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181026   157   V: 5433386-5433542 Caenorhabditis elegans
Exon181029   68   V: 5433586-5433653 Caenorhabditis elegans
Exon181031   274   V: 5433706-5433979 Caenorhabditis elegans
Exon181033   363   V: 5434029-5434391 Caenorhabditis elegans
Exon181035   95   V: 5434448-5434542 Caenorhabditis elegans
Exon181037   108   V: 5434584-5434691 Caenorhabditis elegans
Exon181039   178   V: 5434735-5434912 Caenorhabditis elegans
Exon181041   330   V: 5435447-5435776 Caenorhabditis elegans
Exon181043   110   V: 5435979-5436088 Caenorhabditis elegans
Exon181045   144   V: 5436351-5436494 Caenorhabditis elegans
Exon181047   199   V: 5436548-5436746 Caenorhabditis elegans
Exon181049   304   V: 5436792-5437095 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.2b.1 5433386 5437095 1

1 Sequence

Length
2330

1 Sequence Ontology Term

Identifier Name Description
transcript