WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F08F3.1.1 Sequence Name  F08F3.1.1
Length (nt)  918   Chromosome Location  V: 5446139-5448758
Chromosome . Primary Identifier  V Chromosome Location . Start  5446139
Chromosome Location . End  5448758 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F08F3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017260 F08F3.1 F08F3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F08F3.1 F08F3.1 798   V: 5446154-5446288

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.1.1 5446139 5448758 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181125   150   V: 5446139-5446288 Caenorhabditis elegans
Exon181126   97   V: 5447011-5447107 Caenorhabditis elegans
Exon181127   89   V: 5447160-5447248 Caenorhabditis elegans
Exon181128   84   V: 5447304-5447387 Caenorhabditis elegans
Exon181129   177   V: 5447911-5448087 Caenorhabditis elegans
Exon181130   72   V: 5448326-5448397 Caenorhabditis elegans
Exon181131   249   V: 5448510-5448758 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F08F3.1.1 5446139 5448758 1

1 Sequence

Length
918

1 Sequence Ontology Term

Identifier Name Description
transcript