WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C3.4.1 Sequence Name  T05C3.4.1
Length (nt)  1404   Chromosome Location  V: 5485631-5488866
Chromosome . Primary Identifier  V Chromosome Location . Start  5485631
Chromosome Location . End  5488866 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C3.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001727 grl-18 T05C3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C3.4 T05C3.4 1338   V: 5485697-5485882

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C3.4.1 5485631 5488866 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181132   252   V: 5485631-5485882 Caenorhabditis elegans
Exon181133   212   V: 5485929-5486140 Caenorhabditis elegans
Exon181134   183   V: 5486419-5486601 Caenorhabditis elegans
Exon181135   157   V: 5486675-5486831 Caenorhabditis elegans
Exon181136   40   V: 5487159-5487198 Caenorhabditis elegans
Exon181137   89   V: 5487248-5487336 Caenorhabditis elegans
Exon181138   118   V: 5487397-5487514 Caenorhabditis elegans
Exon181139   154   V: 5487893-5488046 Caenorhabditis elegans
Exon181140   114   V: 5488620-5488733 Caenorhabditis elegans
Exon181141   85   V: 5488782-5488866 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C3.4.1 5485631 5488866 -1

1 Sequence

Length
1404

1 Sequence Ontology Term

Identifier Name Description
transcript