WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T05C3.4 Sequence Name  T05C3.4
Length (nt)  1338   Chromosome Location  V: 5485697-5485882
Chromosome . Primary Identifier  V Chromosome Location . Start  5485697
Chromosome Location . End  5485882
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C3.4

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39030 GRL-18 50.2 445 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00052500
WBRNAi00018223

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:T05C3.4 5485697 5485882 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001727 grl-18 T05C3.4 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:T05C3.4 5485697 5485882 -1
CDS:T05C3.4 5485929 5486140 -1
CDS:T05C3.4 5486419 5486601 -1
CDS:T05C3.4 5486675 5486831 -1
CDS:T05C3.4 5487159 5487198 -1
CDS:T05C3.4 5487248 5487336 -1
CDS:T05C3.4 5487397 5487514 -1
CDS:T05C3.4 5487893 5488046 -1
CDS:T05C3.4 5488620 5488733 -1
CDS:T05C3.4 5488782 5488866 -1

1 Sequence

Length
1338

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T05C3.4.1 T05C3.4.1 1404   V: 5485631-5488866