WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T05C3.5.1 Sequence Name  T05C3.5.1
Length (nt)  1537   Chromosome Location  V: 5503033-5504857
Chromosome . Primary Identifier  V Chromosome Location . Start  5503033
Chromosome Location . End  5504857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T05C3.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001037 dnj-19 T05C3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T05C3.5 T05C3.5 1320   V: 5503238-5503426

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T05C3.5.1 5503033 5504857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181182   394   V: 5503033-5503426 Caenorhabditis elegans
Exon181183   238   V: 5503609-5503846 Caenorhabditis elegans
Exon181184   92   V: 5503895-5503986 Caenorhabditis elegans
Exon181185   813   V: 5504045-5504857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T05C3.5.1 5503033 5504857 -1

1 Sequence

Length
1537

1 Sequence Ontology Term

Identifier Name Description
transcript