WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C24G6.2a.2 Sequence Name  C24G6.2a.2
Length (nt)  4541   Chromosome Location  V: 5522139-5530746
Chromosome . Primary Identifier  V Chromosome Location . Start  5522139
Chromosome Location . End  5530746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24G6.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016059 hir-1 C24G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C24G6.2a C24G6.2a 2712   V: 5523754-5523876

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24G6.2a.2 5522139 5530746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181238   1738   V: 5522139-5523876 Caenorhabditis elegans
Exon181242   72   V: 5524771-5524842 Caenorhabditis elegans
Exon181245   186   V: 5524899-5525084 Caenorhabditis elegans
Exon181248   183   V: 5525138-5525320 Caenorhabditis elegans
Exon181252   73   V: 5525844-5525916 Caenorhabditis elegans
Exon181255   101   V: 5526352-5526452 Caenorhabditis elegans
Exon181258   87   V: 5526504-5526590 Caenorhabditis elegans
Exon181261   79   V: 5526642-5526720 Caenorhabditis elegans
Exon181264   95   V: 5526799-5526893 Caenorhabditis elegans
Exon181267   231   V: 5526941-5527171 Caenorhabditis elegans
Exon181270   169   V: 5527736-5527904 Caenorhabditis elegans
Exon181274   190   V: 5528447-5528636 Caenorhabditis elegans
Exon181277   270   V: 5528687-5528956 Caenorhabditis elegans
Exon181280   235   V: 5529013-5529247 Caenorhabditis elegans
Exon181283   141   V: 5529289-5529429 Caenorhabditis elegans
Exon181286   212   V: 5529476-5529687 Caenorhabditis elegans
Exon181289   169   V: 5529742-5529910 Caenorhabditis elegans
Exon181293   310   V: 5530437-5530746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24G6.2a.2 5522139 5530746 1

1 Sequence

Length
4541

1 Sequence Ontology Term

Identifier Name Description
transcript