WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C24G6.2b Sequence Name  C24G6.2b
Length (nt)  3070   Chromosome Location  V: 5523754-5530532
Chromosome . Primary Identifier  V Chromosome Location . Start  5523754
Chromosome Location . End  5530532 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C24G6.2b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016059 hir-1 C24G6.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C24G6.2b 5523754 5530532 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181240   123   V: 5523754-5523876 Caenorhabditis elegans
Exon181243   72   V: 5524771-5524842 Caenorhabditis elegans
Exon181246   186   V: 5524899-5525084 Caenorhabditis elegans
Exon181249   183   V: 5525138-5525320 Caenorhabditis elegans
Exon181253   73   V: 5525844-5525916 Caenorhabditis elegans
Exon181256   101   V: 5526352-5526452 Caenorhabditis elegans
Exon181259   87   V: 5526504-5526590 Caenorhabditis elegans
Exon181262   79   V: 5526642-5526720 Caenorhabditis elegans
Exon181265   95   V: 5526799-5526893 Caenorhabditis elegans
Exon181268   231   V: 5526941-5527171 Caenorhabditis elegans
Exon181271   169   V: 5527736-5527904 Caenorhabditis elegans
Exon181272   358   V: 5527961-5528318 Caenorhabditis elegans
Exon181275   190   V: 5528447-5528636 Caenorhabditis elegans
Exon181278   270   V: 5528687-5528956 Caenorhabditis elegans
Exon181281   235   V: 5529013-5529247 Caenorhabditis elegans
Exon181284   141   V: 5529289-5529429 Caenorhabditis elegans
Exon181287   212   V: 5529476-5529687 Caenorhabditis elegans
Exon181290   169   V: 5529742-5529910 Caenorhabditis elegans
Exon181291   96   V: 5530437-5530532 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C24G6.2b 5523754 5530532 1

1 Sequence

Length
3070

1 Sequence Ontology Term

Identifier Name Description
transcript