WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:C18C4.7e.3 Sequence Name  C18C4.7e.3
Length (nt)  3876   Chromosome Location  V: 5550313-5557707
Chromosome . Primary Identifier  V Chromosome Location . Start  5550313
Chromosome Location . End  5557707 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7e.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7e C18C4.7e 3069   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7e.3 5550313 5557707 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181346   383   V: 5550313-5550695 Caenorhabditis elegans
Exon181365   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181383   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181393   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181403   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181413   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181423   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181433   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181443   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181453   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181463   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181473   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181482   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181492   475   V: 5557233-5557707 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7e.3 5550313 5557707 -1

1 Sequence

Length
3876

1 Sequence Ontology Term

Identifier Name Description
transcript