WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7e.2 Sequence Name  C18C4.7e.2
Length (nt)  3698   Chromosome Location  V: 5550314-5564617
Chromosome . Primary Identifier  V Chromosome Location . Start  5550314
Chromosome Location . End  5564617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7e.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7e C18C4.7e 3069   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7e.2 5550314 5564617 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181347   382   V: 5550314-5550695 Caenorhabditis elegans
Exon181364   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181382   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181392   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181402   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181412   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181422   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181432   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181442   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181452   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181462   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181472   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181481   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181490   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181520   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181527   146   V: 5564472-5564617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7e.2 5550314 5564617 -1

1 Sequence

Length
3698

1 Sequence Ontology Term

Identifier Name Description
transcript