WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7e.1 Sequence Name  C18C4.7e.1
Length (nt)  3815   Chromosome Location  V: 5550314-5565620
Chromosome . Primary Identifier  V Chromosome Location . Start  5550314
Chromosome Location . End  5565620 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7e C18C4.7e 3069   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7e.1 5550314 5565620 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181348   382   V: 5550314-5550695 Caenorhabditis elegans
Exon181363   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181381   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181391   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181401   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181411   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181421   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181431   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181441   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181451   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181461   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181471   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181480   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181489   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181519   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181525   144   V: 5564472-5564615 Caenorhabditis elegans
Exon181532   57   V: 5564667-5564723 Caenorhabditis elegans
Exon181535   62   V: 5565559-5565620 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7e.1 5550314 5565620 -1

1 Sequence

Length
3815

1 Sequence Ontology Term

Identifier Name Description
transcript