WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7d.2 Sequence Name  C18C4.7d.2
Length (nt)  3551   Chromosome Location  V: 5550316-5557313
Chromosome . Primary Identifier  V Chromosome Location . Start  5550316
Chromosome Location . End  5557313 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7d C18C4.7d 3141   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7d.2 5550316 5557313 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181349   380   V: 5550316-5550695 Caenorhabditis elegans
Exon181361   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181372   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181379   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181389   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181399   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181409   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181419   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181429   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181439   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181449   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181459   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181469   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181479   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181491   81   V: 5557233-5557313 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7d.2 5550316 5557313 -1

1 Sequence

Length
3551

1 Sequence Ontology Term

Identifier Name Description
transcript