WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7a.1 Sequence Name  C18C4.7a.1
Length (nt)  4378   Chromosome Location  V: 5550317-5567219
Chromosome . Primary Identifier  V Chromosome Location . Start  5550317
Chromosome Location . End  5567219 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7a C18C4.7a 4047   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7a.1 5550317 5567219 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181350   379   V: 5550317-5550695 Caenorhabditis elegans
Exon181356   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181367   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181374   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181384   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181394   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181404   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181414   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181424   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181434   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181444   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181454   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181464   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181474   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181484   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181514   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181521   144   V: 5564472-5564615 Caenorhabditis elegans
Exon181529   57   V: 5564667-5564723 Caenorhabditis elegans
Exon181533   60   V: 5565559-5565618 Caenorhabditis elegans
Exon181537   113   V: 5566298-5566410 Caenorhabditis elegans
Exon181539   219   V: 5566745-5566963 Caenorhabditis elegans
Exon181540   109   V: 5567014-5567122 Caenorhabditis elegans
Exon181543   55   V: 5567165-5567219 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7a.1 5550317 5567219 -1

1 Sequence

Length
4378

1 Sequence Ontology Term

Identifier Name Description
transcript