WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7b.2 Sequence Name  C18C4.7b.2
Length (nt)  3885   Chromosome Location  V: 5550320-5565624
Chromosome . Primary Identifier  V Chromosome Location . Start  5550320
Chromosome Location . End  5565624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7b C18C4.7b 3537   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7b.2 5550320 5565624 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181351   376   V: 5550320-5550695 Caenorhabditis elegans
Exon181358   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181369   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181376   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181386   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181396   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181406   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181416   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181426   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181436   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181446   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181456   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181466   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181476   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181486   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181516   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181523   144   V: 5564472-5564615 Caenorhabditis elegans
Exon181531   57   V: 5564667-5564723 Caenorhabditis elegans
Exon181536   66   V: 5565559-5565624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7b.2 5550320 5565624 -1

1 Sequence

Length
3885

1 Sequence Ontology Term

Identifier Name Description
transcript