WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7d.3 Sequence Name  C18C4.7d.3
Length (nt)  3481   Chromosome Location  V: 5550321-5556039
Chromosome . Primary Identifier  V Chromosome Location . Start  5550321
Chromosome Location . End  5556039 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7d.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7d C18C4.7d 3141   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7d.3 5550321 5556039 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181352   375   V: 5550321-5550695 Caenorhabditis elegans
Exon181362   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181373   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181380   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181390   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181400   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181410   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181420   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181430   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181440   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181450   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181460   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181470   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181483   134   V: 5555906-5556039 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7d.3 5550321 5556039 -1

1 Sequence

Length
3481

1 Sequence Ontology Term

Identifier Name Description
transcript