WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7d.1 Sequence Name  C18C4.7d.1
Length (nt)  3746   Chromosome Location  V: 5550338-5564617
Chromosome . Primary Identifier  V Chromosome Location . Start  5550338
Chromosome Location . End  5564617 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7d C18C4.7d 3141   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7d.1 5550338 5564617 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181353   358   V: 5550338-5550695 Caenorhabditis elegans
Exon181360   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181371   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181378   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181388   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181398   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181408   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181418   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181428   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181438   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181448   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181458   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181468   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181478   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181488   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181518   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181526   146   V: 5564472-5564617 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C18C4.7d.1 5550338 5564617 -1

1 Sequence

Length
3746

1 Sequence Ontology Term

Identifier Name Description
transcript