WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18C4.7b.1 Sequence Name  C18C4.7b.1
Length (nt)  4689   Chromosome Location  V: 5550338-5567217
Chromosome . Primary Identifier  V Chromosome Location . Start  5550338
Chromosome Location . End  5567217 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18C4.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015968 C18C4.7 C18C4.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18C4.7b C18C4.7b 3537   V: 5550641-5550695

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7b.1 5550338 5567217 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181354   358   V: 5550338-5550695 Caenorhabditis elegans
Exon181357   138   V: 5550743-5550880 Caenorhabditis elegans
Exon181368   72   V: 5551611-5551682 Caenorhabditis elegans
Exon181375   117   V: 5551773-5551889 Caenorhabditis elegans
Exon181385   134   V: 5551941-5552074 Caenorhabditis elegans
Exon181395   788   V: 5552138-5552925 Caenorhabditis elegans
Exon181405   118   V: 5552982-5553099 Caenorhabditis elegans
Exon181415   463   V: 5553148-5553610 Caenorhabditis elegans
Exon181425   353   V: 5553926-5554278 Caenorhabditis elegans
Exon181435   126   V: 5554353-5554478 Caenorhabditis elegans
Exon181445   241   V: 5554526-5554766 Caenorhabditis elegans
Exon181455   251   V: 5554903-5555153 Caenorhabditis elegans
Exon181465   171   V: 5555687-5555857 Caenorhabditis elegans
Exon181475   118   V: 5555906-5556023 Caenorhabditis elegans
Exon181485   71   V: 5557233-5557303 Caenorhabditis elegans
Exon181515   81   V: 5564318-5564398 Caenorhabditis elegans
Exon181522   144   V: 5564472-5564615 Caenorhabditis elegans
Exon181530   57   V: 5564667-5564723 Caenorhabditis elegans
Exon181534   60   V: 5565559-5565618 Caenorhabditis elegans
Exon181538   666   V: 5566298-5566963 Caenorhabditis elegans
Exon181541   109   V: 5567014-5567122 Caenorhabditis elegans
Exon181542   53   V: 5567165-5567217 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18C4.7b.1 5550338 5567217 -1

1 Sequence

Length
4689

1 Sequence Ontology Term

Identifier Name Description
transcript