WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CD4.11.1 Sequence Name  CD4.11.1
Length (nt)  1620   Chromosome Location  V: 5585133-5591683
Chromosome . Primary Identifier  V Chromosome Location . Start  5585133
Chromosome Location . End  5591683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CD4.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00044542 CD4.11 CD4.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CD4.11 CD4.11 1491   V: 5585182-5585227

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CD4.11.1 5585133 5591683 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181590   95   V: 5585133-5585227 Caenorhabditis elegans
Exon181591   292   V: 5585553-5585844 Caenorhabditis elegans
Exon181592   83   V: 5585892-5585974 Caenorhabditis elegans
Exon181594   106   V: 5586391-5586496 Caenorhabditis elegans
Exon181598   223   V: 5589919-5590141 Caenorhabditis elegans
Exon181599   180   V: 5590186-5590365 Caenorhabditis elegans
Exon181600   137   V: 5590854-5590990 Caenorhabditis elegans
Exon181601   83   V: 5591040-5591122 Caenorhabditis elegans
Exon181602   140   V: 5591173-5591312 Caenorhabditis elegans
Exon181603   108   V: 5591356-5591463 Caenorhabditis elegans
Exon181604   173   V: 5591511-5591683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CD4.11.1 5585133 5591683 1

1 Sequence

Length
1620

1 Sequence Ontology Term

Identifier Name Description
transcript