WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:CD4.4.1 Sequence Name  CD4.4.1
Length (nt)  807   Chromosome Location  V: 5592700-5593612
Chromosome . Primary Identifier  V Chromosome Location . Start  5592700
Chromosome Location . End  5593612 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
CD4.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016990 vps-37 CD4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CD4.4 CD4.4 705   V: 5592707-5592763

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:CD4.4.1 5592700 5593612 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181605   64   V: 5592700-5592763 Caenorhabditis elegans
Exon181606   90   V: 5592818-5592907 Caenorhabditis elegans
Exon181607   653   V: 5592960-5593612 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:CD4.4.1 5592700 5593612 1

1 Sequence

Length
807

1 Sequence Ontology Term

Identifier Name Description
transcript