WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:M03E7.4.1 Sequence Name  M03E7.4.1
Length (nt)  1798   Chromosome Location  V: 5609303-5613209
Chromosome . Primary Identifier  V Chromosome Location . Start  5609303
Chromosome Location . End  5613209 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M03E7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019756 lrpc-1 M03E7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:M03E7.4 M03E7.4 1629   V: 5609414-5609501

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:M03E7.4.1 5609303 5613209 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181645   199   V: 5609303-5609501 Caenorhabditis elegans
Exon181646   329   V: 5609868-5610196 Caenorhabditis elegans
Exon181647   66   V: 5610245-5610310 Caenorhabditis elegans
Exon181648   224   V: 5610366-5610589 Caenorhabditis elegans
Exon181649   86   V: 5610716-5610801 Caenorhabditis elegans
Exon181650   150   V: 5610848-5610997 Caenorhabditis elegans
Exon181651   112   V: 5611044-5611155 Caenorhabditis elegans
Exon181652   117   V: 5611773-5611889 Caenorhabditis elegans
Exon181653   120   V: 5611938-5612057 Caenorhabditis elegans
Exon181654   125   V: 5612282-5612406 Caenorhabditis elegans
Exon181655   87   V: 5612891-5612977 Caenorhabditis elegans
Exon181656   183   V: 5613027-5613209 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:M03E7.4.1 5609303 5613209 -1

1 Sequence

Length
1798

1 Sequence Ontology Term

Identifier Name Description
transcript