WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14C11.8a.1 Sequence Name  C14C11.8a.1
Length (nt)  2135   Chromosome Location  V: 5669604-5676087
Chromosome . Primary Identifier  V Chromosome Location . Start  5669604
Chromosome Location . End  5676087 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14C11.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004104 pqn-13 C14C11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14C11.8a C14C11.8a 1719   V: 5670015-5670221

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.8a.1 5669604 5676087 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181766   618   V: 5669604-5670221 Caenorhabditis elegans
Exon181768   129   V: 5671168-5671296 Caenorhabditis elegans
Exon181770   63   V: 5671346-5671408 Caenorhabditis elegans
Exon181772   471   V: 5671457-5671927 Caenorhabditis elegans
Exon181774   141   V: 5672137-5672277 Caenorhabditis elegans
Exon181777   141   V: 5673143-5673283 Caenorhabditis elegans
Exon181779   81   V: 5673332-5673412 Caenorhabditis elegans
Exon181781   171   V: 5673457-5673627 Caenorhabditis elegans
Exon181783   144   V: 5674298-5674441 Caenorhabditis elegans
Exon181786   176   V: 5675912-5676087 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.8a.1 5669604 5676087 -1

1 Sequence

Length
2135

1 Sequence Ontology Term

Identifier Name Description
transcript