WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14C11.8b.1 Sequence Name  C14C11.8b.1
Length (nt)  2422   Chromosome Location  V: 5669608-5676111
Chromosome . Primary Identifier  V Chromosome Location . Start  5669608
Chromosome Location . End  5676111 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14C11.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004104 pqn-13 C14C11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14C11.8b C14C11.8b 1986   V: 5670015-5670221

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.8b.1 5669608 5676111 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181767   614   V: 5669608-5670221 Caenorhabditis elegans
Exon181769   129   V: 5671168-5671296 Caenorhabditis elegans
Exon181771   63   V: 5671346-5671408 Caenorhabditis elegans
Exon181773   471   V: 5671457-5671927 Caenorhabditis elegans
Exon181775   141   V: 5672137-5672277 Caenorhabditis elegans
Exon181776   267   V: 5672326-5672592 Caenorhabditis elegans
Exon181778   141   V: 5673143-5673283 Caenorhabditis elegans
Exon181780   81   V: 5673332-5673412 Caenorhabditis elegans
Exon181782   171   V: 5673457-5673627 Caenorhabditis elegans
Exon181784   144   V: 5674298-5674441 Caenorhabditis elegans
Exon181787   200   V: 5675912-5676111 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14C11.8b.1 5669608 5676111 -1

1 Sequence

Length
2422

1 Sequence Ontology Term

Identifier Name Description
transcript