WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25B4.9.1 Sequence Name  F25B4.9.1
Length (nt)  770   Chromosome Location  V: 5700154-5701080
Chromosome . Primary Identifier  V Chromosome Location . Start  5700154
Chromosome Location . End  5701080 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25B4.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017772 clec-1 F25B4.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25B4.9 F25B4.9 522   V: 5700214-5700262

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25B4.9.1 5700154 5701080 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181835   109   V: 5700154-5700262 Caenorhabditis elegans
Exon181836   76   V: 5700318-5700393 Caenorhabditis elegans
Exon181837   316   V: 5700446-5700761 Caenorhabditis elegans
Exon181838   269   V: 5700812-5701080 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25B4.9.1 5700154 5701080 1

1 Sequence

Length
770

1 Sequence Ontology Term

Identifier Name Description
transcript