WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C53A3.1.1 Sequence Name  C53A3.1.1
Length (nt)  836   Chromosome Location  V: 5758792-5760232
Chromosome . Primary Identifier  V Chromosome Location . Start  5758792
Chromosome Location . End  5760232 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A3.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016891 C53A3.1 C53A3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C53A3.1 C53A3.1 834   V: 5758792-5758941

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C53A3.1.1 5758792 5760232 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181928   150   V: 5758792-5758941 Caenorhabditis elegans
Exon181929   334   V: 5758987-5759320 Caenorhabditis elegans
Exon181930   273   V: 5759742-5760014 Caenorhabditis elegans
Exon181931   79   V: 5760154-5760232 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C53A3.1.1 5758792 5760232 -1

1 Sequence

Length
836

1 Sequence Ontology Term

Identifier Name Description
transcript