WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C53A3.2 Sequence Name  C53A3.2
Length (nt)  1050   Chromosome Location  V: 5762643-5762826
Chromosome . Primary Identifier  V Chromosome Location . Start  5762643
Chromosome Location . End  5762826
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C53A3.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE16942 PGPH-3 38.8 349 Caenorhabditis elegans
 

Other

12 RNAi

WormBase ID
WBRNAi00043055
WBRNAi00047299
WBRNAi00012329
WBRNAi00014941
WBRNAi00016944
WBRNAi00076237
WBRNAi00076430
WBRNAi00076565
WBRNAi00030093
WBRNAi00085303
WBRNAi00064332
WBRNAi00117479

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C53A3.2 5762643 5762826 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016892 pgph-3 C53A3.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:C53A3.2 5762643 5762826 -1
CDS:C53A3.2 5762878 5763550 -1
CDS:C53A3.2 5763601 5763793 -1

1 Sequence

Length
1050

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C53A3.2.1 C53A3.2.1 1252   V: 5762494-5763846