WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44E7.4b.1 Sequence Name  F44E7.4b.1
Length (nt)  3334   Chromosome Location  V: 5772832-5776953
Chromosome . Primary Identifier  V Chromosome Location . Start  5772832
Chromosome Location . End  5776953 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44E7.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018426 F44E7.4 F44E7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44E7.4b F44E7.4b 3156   V: 5772999-5773251

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.4b.1 5772832 5776953 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181953   420   V: 5772832-5773251 Caenorhabditis elegans
Exon181956   337   V: 5773299-5773635 Caenorhabditis elegans
Exon181959   601   V: 5773682-5774282 Caenorhabditis elegans
Exon181965   87   V: 5774600-5774686 Caenorhabditis elegans
Exon181967   809   V: 5774734-5775542 Caenorhabditis elegans
Exon181971   248   V: 5775589-5775836 Caenorhabditis elegans
Exon181975   569   V: 5775889-5776457 Caenorhabditis elegans
Exon181979   145   V: 5776511-5776655 Caenorhabditis elegans
Exon181984   118   V: 5776836-5776953 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.4b.1 5772832 5776953 -1

1 Sequence

Length
3334

1 Sequence Ontology Term

Identifier Name Description
transcript