WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44E7.5a.1 Sequence Name  F44E7.5a.1
Length (nt)  1596   Chromosome Location  V: 5778817-5780922
Chromosome . Primary Identifier  V Chromosome Location . Start  5778817
Chromosome Location . End  5780922 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44E7.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018427 F44E7.5 F44E7.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44E7.5a F44E7.5a 1242   V: 5779025-5779528

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.5a.1 5778817 5780922 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon181988   712   V: 5778817-5779528 Caenorhabditis elegans
Exon181990   153   V: 5779577-5779729 Caenorhabditis elegans
Exon181992   337   V: 5779781-5780117 Caenorhabditis elegans
Exon181995   116   V: 5780333-5780448 Caenorhabditis elegans
Exon182002   278   V: 5780645-5780922 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.5a.1 5778817 5780922 -1

1 Sequence

Length
1596

1 Sequence Ontology Term

Identifier Name Description
transcript