WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F44E7.8b.1 Sequence Name  F44E7.8b.1
Length (nt)  1922   Chromosome Location  V: 5785957-5790553
Chromosome . Primary Identifier  V Chromosome Location . Start  5785957
Chromosome Location . End  5790553 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F44E7.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018430 nhr-142 F44E7.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F44E7.8b F44E7.8b 1326   V: 5786066-5786161

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.8b.1 5785957 5790553 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182081   205   V: 5785957-5786161 Caenorhabditis elegans
Exon182084   152   V: 5786211-5786362 Caenorhabditis elegans
Exon182086   214   V: 5786413-5786626 Caenorhabditis elegans
Exon182088   213   V: 5787477-5787689 Caenorhabditis elegans
Exon182090   108   V: 5787741-5787848 Caenorhabditis elegans
Exon182092   185   V: 5787898-5788082 Caenorhabditis elegans
Exon182094   134   V: 5788459-5788592 Caenorhabditis elegans
Exon182096   104   V: 5788638-5788741 Caenorhabditis elegans
Exon182098   75   V: 5789381-5789455 Caenorhabditis elegans
Exon182100   532   V: 5790022-5790553 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F44E7.8b.1 5785957 5790553 -1

1 Sequence

Length
1922

1 Sequence Ontology Term

Identifier Name Description
transcript