WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F58D7.1.1 Sequence Name  F58D7.1.1
Length (nt)  942   Chromosome Location  V: 5927647-5930417
Chromosome . Primary Identifier  V Chromosome Location . Start  5927647
Chromosome Location . End  5930417 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F58D7.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019032 srsx-17 F58D7.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F58D7.1 F58D7.1 942   V: 5927647-5927779

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F58D7.1.1 5927647 5930417 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon182309   133   V: 5927647-5927779 Caenorhabditis elegans
Exon182310   79   V: 5928109-5928187 Caenorhabditis elegans
Exon182311   129   V: 5928235-5928363 Caenorhabditis elegans
Exon182312   134   V: 5929412-5929545 Caenorhabditis elegans
Exon182314   105   V: 5929698-5929802 Caenorhabditis elegans
Exon182315   197   V: 5929850-5930046 Caenorhabditis elegans
Exon182316   165   V: 5930253-5930417 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F58D7.1.1 5927647 5930417 1

1 Sequence

Length
942

1 Sequence Ontology Term

Identifier Name Description
transcript